Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mobilisation protein (mobc) | SAMN03003324_04161 | Not Available | Negative | 4553825 - 4554265 | 16511.1 |
| hypothetical protein | SAMN03003324_04162 | Not Available | Positive | 4554564 - 4554740 | 6868.52 |
| protein of unknown function | SAMN03003324_04165 | Not Available | Positive | 4555473 - 4556504 | 40751.2 |
| thioredoxin | SAMN03003324_04166 | Not Available | Positive | 4556825 - 4558420 | 59933.1 |
| hypothetical protein | SAMN03003324_04167 | Not Available | Positive | 4558444 - 4558740 | 10232.3 |
| hypothetical protein | SAMN03003324_04168 | Not Available | Positive | 4558897 - 4559127 | 7567.05 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN03003324_04169 | Not Available | Positive | 4559236 - 4560327 | 41471.4 |
| hypothetical protein | SAMN03003324_04170 | Not Available | Positive | 4560395 - 4561270 | 34442.6 |
| atp-binding cassette, subfamily b | SAMN03003324_04171 | Not Available | Positive | 4561349 - 4563526 | 82413.4 |
| hlyd family secretion protein | SAMN03003324_04172 | Not Available | Positive | 4563588 - 4564655 | 40183.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

