Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_04151 | Not Available | Negative | 4545676 - 4546338 | 24705.9 |
| aaa-like domain-containing protein | SAMN03003324_04152 | Not Available | Negative | 4546369 - 4549185 | 108332.0 |
| hypothetical protein | SAMN03003324_04153 | Not Available | Negative | 4549163 - 4549513 | 12877.0 |
| protein of unknown function | SAMN03003324_04154 | Not Available | Negative | 4549517 - 4549825 | 10585.2 |
| protein of unknown function | SAMN03003324_04155 | Not Available | Negative | 4549892 - 4550149 | 9343.42 |
| protein of unknown function | SAMN03003324_04156 | Not Available | Negative | 4550332 - 4550631 | 10885.6 |
| hypothetical protein | SAMN03003324_04157 | Not Available | Negative | 4550637 - 4551032 | 14835.5 |
| hypothetical protein | SAMN03003324_04158 | Not Available | Negative | 4551029 - 4551493 | 17519.0 |
| chromosome partitioning protein | SAMN03003324_04159 | Not Available | Negative | 4551495 - 4552163 | 25004.7 |
| relaxase/mobilisation nuclease domain-containing protein | SAMN03003324_04160 | Not Available | Negative | 4552188 - 4553828 | 62164.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

