Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phytanoyl-coa dioxygenase (phyh) | SAMN03003324_04141 | Not Available | Positive | 4538696 - 4539784 | 41743.5 |
| transposase | SAMN03003324_04142 | Not Available | Negative | 4539680 - 4539986 | 11840.9 |
| hypothetical protein | SAMN03003324_04143 | Not Available | Negative | 4539987 - 4540147 | 5986.45 |
| bacteroides conjugative transposon tram protein | SAMN03003324_04144 | Not Available | Negative | 4540149 - 4541369 | 45253.6 |
| hypothetical protein | SAMN03003324_04145 | Not Available | Negative | 4541366 - 4541797 | 16001.8 |
| bacteroides conjugative transposon trak protein | SAMN03003324_04146 | Not Available | Negative | 4541775 - 4542389 | 23601.5 |
| hypothetical protein | SAMN03003324_04147 | Not Available | Negative | 4542415 - 4543581 | 42455.5 |
| hypothetical protein | SAMN03003324_04148 | Not Available | Negative | 4543593 - 4544363 | 29956.2 |
| hypothetical protein | SAMN03003324_04149 | Not Available | Negative | 4544360 - 4545022 | 25640.4 |
| hypothetical protein | SAMN03003324_04150 | Not Available | Negative | 4545029 - 4545679 | 24533.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

