Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_04121 | Not Available | Positive | 4517881 - 4518375 | 19045.3 |
| n-acetyl-alpha-d-glucosaminyl l-malate synthase bsha | SAMN03003324_04122 | Not Available | Positive | 4518463 - 4519602 | 42346.1 |
| 6-phosphogluconolactonase | SAMN03003324_04123 | Not Available | Negative | 4519688 - 4520806 | 40371.9 |
| 23s rrna pseudouridine2605 synthase | SAMN03003324_04124 | Not Available | Negative | 4520897 - 4521940 | 39514.1 |
| integrase core domain-containing protein | SAMN03003324_04125 | Not Available | Positive | 4521941 - 4522206 | 10159.0 |
| pas domain s-box-containing protein | SAMN03003324_04126 | Not Available | Negative | 4522250 - 4523095 | 32257.0 |
| subtilase family protein | SAMN03003324_04127 | Not Available | Negative | 4523197 - 4524801 | 58575.9 |
| uroporphyrin-iii c-methyltransferase | SAMN03003324_04128 | Not Available | Negative | 4525008 - 4525799 | 28515.3 |
| transcriptional regulator, badm/rrf2 family | SAMN03003324_04129 | Not Available | Negative | 4525889 - 4526326 | 16129.7 |
| hypothetical protein | SAMN03003324_04130 | Not Available | Positive | 4526658 - 4526969 | 11171.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

