Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN03003324_04111 | Not Available | Positive | 4506292 - 4507398 | 41909.1 |
| cysteinyl-trna synthetase | SAMN03003324_04112 | Not Available | Positive | 4507538 - 4508998 | 55312.2 |
| protein of unknown function | SAMN03003324_04113 | Not Available | Positive | 4509026 - 4509883 | 31737.4 |
| glycerophosphoryl diester phosphodiesterase | SAMN03003324_04114 | Not Available | Positive | 4510015 - 4510932 | 35165.9 |
| periplasmic chaperone for outer membrane proteins sura | SAMN03003324_04115 | Not Available | Negative | 4511016 - 4512398 | 52991.6 |
| hypothetical protein | SAMN03003324_04116 | Not Available | Negative | 4512461 - 4513048 | 22788.1 |
| hypothetical protein | SAMN03003324_04117 | Not Available | Positive | 4513154 - 4513669 | 19408.6 |
| xtp/ditp diphosphohydrolase | SAMN03003324_04118 | Not Available | Positive | 4513666 - 4514250 | 21096.0 |
| osta-like protein | SAMN03003324_04119 | Not Available | Negative | 4514243 - 4516483 | 83508.2 |
| trna(ile)-lysidine synthase | SAMN03003324_04120 | Not Available | Positive | 4516549 - 4517880 | 50214.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

