Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactose mutarotase | SAMN03003324_00346 | Not Available | Negative | 378234 - 379100 | 33036.2 |
| response regulator receiver domain-containing protein | SAMN03003324_00347 | Not Available | Negative | 379111 - 379485 | 14019.9 |
| hypothetical protein | SAMN03003324_00348 | Not Available | Positive | 379947 - 380132 | 7149.52 |
| glycine zipper | SAMN03003324_00349 | Not Available | Negative | 380286 - 380762 | 16148.6 |
| hypothetical protein | SAMN03003324_00350 | Not Available | Negative | 380837 - 381070 | 8474.37 |
| cold-shock dna-binding protein family | SAMN03003324_00351 | Not Available | Positive | 381288 - 381494 | 7424.62 |
| nucleoside-diphosphate-sugar epimerase | SAMN03003324_00352 | Not Available | Positive | 381567 - 382397 | 30564.7 |
| metallo-beta-lactamase family protein | SAMN03003324_00353 | Not Available | Positive | 382501 - 383886 | 51448.8 |
| heme oxygenase | SAMN03003324_00354 | Not Available | Negative | 383930 - 384523 | 22025.4 |
| ompa-ompf porin, oop family | SAMN03003324_00355 | Not Available | Positive | 384909 - 386237 | 47655.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

