Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphosulfolactate synthase | SAMN03003324_04091 | Not Available | Positive | 4485987 - 4486754 | 28800.6 |
| shikimate dehydrogenase | SAMN03003324_04092 | Not Available | Positive | 4486764 - 4487507 | 27858.4 |
| glyoxylase, beta-lactamase superfamily ii | SAMN03003324_04093 | Not Available | Positive | 4487558 - 4488196 | 23594.0 |
| lipoprotein-releasing system permease protein | SAMN03003324_04094 | Not Available | Positive | 4488228 - 4489460 | 45447.9 |
| hypothetical protein | SAMN03003324_04095 | Not Available | Positive | 4489462 - 4489842 | 14126.8 |
| 1,4-dihydroxy-6-naphthoate synthase | SAMN03003324_04096 | Not Available | Negative | 4489849 - 4490709 | 31675.3 |
| futalosine hydrolase | SAMN03003324_04097 | Not Available | Negative | 4490744 - 4491373 | 22900.4 |
| 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase | SAMN03003324_04098 | Not Available | Positive | 4491559 - 4491969 | 15905.8 |
| gtp cyclohydrolase i | SAMN03003324_04099 | Not Available | Positive | 4491981 - 4492616 | 24168.1 |
| [acyl-carrier-protein] s-malonyltransferase | SAMN03003324_04100 | Not Available | Positive | 4492661 - 4493545 | 31029.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

