Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anthranilate synthase component 2 | SAMN03003324_04081 | Not Available | Positive | 4474729 - 4475301 | 21337.8 |
| indole-3-glycerol phosphate synthase | SAMN03003324_04082 | Not Available | Positive | 4475309 - 4476100 | 28965.1 |
| gtp-binding protein hflx | SAMN03003324_04083 | Not Available | Positive | 4476123 - 4477316 | 45441.8 |
| ribosome-binding factor a | SAMN03003324_04084 | Not Available | Positive | 4477337 - 4477723 | 14689.4 |
| hypothetical protein | SAMN03003324_04085 | Not Available | Positive | 4477798 - 4478232 | 17054.6 |
| leucyl/phenylalanyl-trna--protein transferase | SAMN03003324_04086 | Not Available | Positive | 4478250 - 4478891 | 23815.5 |
| helicase conserved c-terminal domain-containing protein | SAMN03003324_04087 | Not Available | Negative | 4478888 - 4481785 | 112479.0 |
| hypothetical protein | SAMN03003324_04088 | Not Available | Positive | 4482041 - 4482622 | 21137.6 |
| aldehyde dehydrogenase (nad+) | SAMN03003324_04089 | Not Available | Negative | 4482676 - 4484217 | 55547.6 |
| tetratricopeptide repeat-containing protein | SAMN03003324_04090 | Not Available | Positive | 4484520 - 4485923 | 55205.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

