Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_04070 | Not Available | Negative | 4461619 - 4462362 | 27605.9 |
| dna polymerase-3 subunit gamma/tau | SAMN03003324_04071 | Not Available | Positive | 4462467 - 4464269 | 67230.7 |
| hypothetical protein | SAMN03003324_04072 | Not Available | Negative | 4464278 - 4464703 | 15937.5 |
| isocitrate dehydrogenase (nadp) | SAMN03003324_04073 | Not Available | Positive | 4464834 - 4466069 | 46537.5 |
| hypothetical protein | SAMN03003324_04074 | Not Available | Positive | 4466226 - 4466504 | 10480.5 |
| lrp/asnc family transcriptional regulator, regulator for asna, asnc and gida | SAMN03003324_04076 | Not Available | Negative | 4467072 - 4467548 | 17920.9 |
| imidazolonepropionase | SAMN03003324_04077 | Not Available | Negative | 4468181 - 4469485 | 46974.3 |
| imidazolonepropionase | SAMN03003324_04078 | Not Available | Negative | 4469478 - 4472477 | 108874.0 |
| hypothetical protein | SAMN03003324_04079 | Not Available | Positive | 4472656 - 4473102 | 16640.0 |
| anthranilate synthase component 1 | SAMN03003324_04080 | Not Available | Positive | 4473309 - 4474715 | 53045.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

