Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_04030 | Not Available | Negative | 4422168 - 4423616 | 49716.7 |
| tonb-dependent receptor | SAMN03003324_04031 | Not Available | Negative | 4423760 - 4426549 | 103772.0 |
| uncharacterized membrane protein ygl010w | SAMN03003324_04032 | Not Available | Negative | 4426664 - 4427191 | 20386.5 |
| ribonucrease y | SAMN03003324_04033 | Not Available | Negative | 4427272 - 4428834 | 58501.9 |
| hypothetical protein | SAMN03003324_04034 | Not Available | Positive | 4428860 - 4428997 | 5373.81 |
| cell division protein zapa | SAMN03003324_04035 | Not Available | Negative | 4429086 - 4429433 | 13429.2 |
| hypothetical protein | SAMN03003324_04036 | Not Available | Negative | 4429409 - 4429699 | 10782.2 |
| phenylalanyl-trna synthetase beta subunit | SAMN03003324_04037 | Not Available | Negative | 4429751 - 4432150 | 88360.9 |
| dna repair protein radc | SAMN03003324_04038 | Not Available | Negative | 4432232 - 4432930 | 25795.3 |
| small subunit ribosomal protein s20 | SAMN03003324_04039 | Not Available | Negative | 4432992 - 4433246 | 9800.21 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

