Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| y_y_y domain-containing protein | SAMN03003324_04020 | Not Available | Negative | 4410314 - 4413217 | 110793.0 |
| upf0176 protein | SAMN03003324_04021 | Not Available | Negative | 4413399 - 4414337 | 34941.4 |
| cytochrome c oxidase assembly protein subunit 15 | SAMN03003324_04022 | Not Available | Negative | 4414399 - 4415454 | 40213.4 |
| 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase | SAMN03003324_04023 | Not Available | Negative | 4415417 - 4415737 | 12031.4 |
| hypothetical protein | SAMN03003324_04024 | Not Available | Negative | 4416617 - 4416929 | 12225.8 |
| small subunit ribosomal protein s21 | SAMN03003324_04025 | Not Available | Negative | 4417114 - 4417347 | 9172.38 |
| acyl-coa dehydrogenase | SAMN03003324_04026 | Not Available | Negative | 4417525 - 4418697 | 42397.9 |
| adenine phosphoribosyltransferase | SAMN03003324_04027 | Not Available | Negative | 4418858 - 4419385 | 19296.8 |
| dna uptake protein come | SAMN03003324_04028 | Not Available | Negative | 4419378 - 4420277 | 34468.6 |
| putative hemolysin | SAMN03003324_04029 | Not Available | Positive | 4420356 - 4422107 | 66616.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

