Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted dehydrogenase | SAMN03003324_00336 | Not Available | Negative | 362861 - 364183 | 49456.6 |
| formylglycine-generating enzyme, required for sulfatase activity, contains sumf1/fge domain | SAMN03003324_00337 | Not Available | Negative | 364229 - 365194 | 36361.9 |
| starch-binding associating with outer membrane | SAMN03003324_00338 | Not Available | Negative | 365246 - 367126 | 70639.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN03003324_00339 | Not Available | Negative | 367162 - 370671 | 129653.0 |
| fecr family protein | SAMN03003324_00340 | Not Available | Negative | 370776 - 371840 | 40310.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN03003324_00341 | Not Available | Negative | 371933 - 372502 | 21429.2 |
| hypothetical protein | SAMN03003324_00342 | Not Available | Positive | 372679 - 373380 | 25833.5 |
| gluconate kinase, fggy family | SAMN03003324_00343 | Not Available | Negative | 373403 - 374917 | 54666.8 |
| predicted arabinose efflux permease, mfs family | SAMN03003324_00344 | Not Available | Negative | 374927 - 376273 | 48705.0 |
| hypothetical protein | SAMN03003324_00345 | Not Available | Positive | 376303 - 378189 | 71236.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

