Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacteriophytochrome (light-regulated signal transduction histidine kinase) | SAMN03003324_03950 | Not Available | Negative | 4318851 - 4321088 | 83837.7 |
| hypothetical protein | SAMN03003324_03951 | Not Available | Negative | 4321237 - 4321458 | 8544.52 |
| hypothetical protein | SAMN03003324_03952 | Not Available | Positive | 4321988 - 4322365 | 13783.7 |
| abc-2 type transport system atp-binding protein | SAMN03003324_03953 | Not Available | Positive | 4322484 - 4323179 | 25227.6 |
| iron complex outermembrane recepter protein | SAMN03003324_03954 | Not Available | Positive | 4323185 - 4325707 | 93699.9 |
| abc-2 type transport system permease protein | SAMN03003324_03955 | Not Available | Positive | 4325707 - 4327152 | 54305.0 |
| abc-2 type transport system permease protein | SAMN03003324_03956 | Not Available | Positive | 4327156 - 4328520 | 51990.6 |
| hypothetical protein | SAMN03003324_03957 | Not Available | Negative | 4328832 - 4328981 | 5834.27 |
| bacteriophytochrome (light-regulated signal transduction histidine kinase) | SAMN03003324_03958 | Not Available | Negative | 4329575 - 4331824 | 84223.8 |
| hypothetical protein | SAMN03003324_03959 | Not Available | Negative | 4331879 - 4332040 | 5917.47 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

