Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN03003324_03920 | Not Available | Positive | 4278707 - 4279321 | 23633.0 |
| transcriptional regulator, tetr family | SAMN03003324_03921 | Not Available | Positive | 4279436 - 4280044 | 23317.3 |
| outer membrane protein tolc | SAMN03003324_03922 | Not Available | Positive | 4280075 - 4281397 | 49647.4 |
| rnd family efflux transporter, mfp subunit | SAMN03003324_03923 | Not Available | Positive | 4281394 - 4282458 | 37898.6 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN03003324_03924 | Not Available | Positive | 4282494 - 4285685 | 115966.0 |
| hypothetical protein | SAMN03003324_03925 | Not Available | Positive | 4285784 - 4286626 | 31565.6 |
| dihydrolipoamide dehydrogenase | SAMN03003324_03926 | Not Available | Negative | 4286665 - 4288071 | 49794.3 |
| 4-amino-4-deoxy-l-arabinose transferase | SAMN03003324_03927 | Not Available | Negative | 4288135 - 4289817 | 64270.6 |
| putative flippase gtra (transmembrane translocase of bactoprenol-linked glucose) | SAMN03003324_03928 | Not Available | Negative | 4289821 - 4290264 | 16508.4 |
| hypothetical protein | SAMN03003324_03929 | Not Available | Positive | 4290400 - 4292286 | 71409.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

