Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_00326 | Not Available | Positive | 355193 - 355639 | 16974.4 |
| n-acetylmuramoyl-l-alanine amidase | SAMN03003324_00327 | Not Available | Positive | 355857 - 356696 | 30793.0 |
| protein of unknown function | SAMN03003324_00328 | Not Available | Negative | 356755 - 357237 | 18252.1 |
| hypothetical protein | SAMN03003324_00329 | Not Available | Negative | 357280 - 357963 | 25556.8 |
| arac-type dna-binding protein | SAMN03003324_00330 | Not Available | Negative | 358037 - 358897 | 32546.4 |
| hypothetical protein | SAMN03003324_00331 | Not Available | Positive | 358926 - 359249 | 12785.2 |
| abc-type multidrug transport system, atpase component | SAMN03003324_00332 | Not Available | Positive | 359296 - 359988 | 26112.7 |
| integral membrane protein, ykoy family | SAMN03003324_00333 | Not Available | Negative | 359937 - 360755 | 30790.2 |
| hydroxypyruvate isomerase | SAMN03003324_00334 | Not Available | Negative | 360868 - 361809 | 34989.0 |
| thiamine biosynthesis lipoprotein | SAMN03003324_00335 | Not Available | Negative | 361845 - 362846 | 36850.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

