Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerol transferase mdob | SAMN03003324_03880 | Not Available | Negative | 4243842 - 4245794 | 73981.2 |
| putative mg2+ transporter-c (mgtc) family protein | SAMN03003324_03881 | Not Available | Negative | 4245818 - 4246282 | 16515.4 |
| hypothetical protein | SAMN03003324_03882 | Not Available | Negative | 4246286 - 4246513 | 8702.58 |
| hd domain-containing protein | SAMN03003324_03883 | Not Available | Negative | 4246479 - 4247084 | 23442.1 |
| hypothetical protein | SAMN03003324_03884 | Not Available | Negative | 4247098 - 4247295 | 7686.0 |
| uncharacterized membrane protein | SAMN03003324_03885 | Not Available | Negative | 4247318 - 4247989 | 25301.2 |
| zinc transporter, zip family | SAMN03003324_03886 | Not Available | Negative | 4248019 - 4248762 | 26315.9 |
| pap2 superfamily protein | SAMN03003324_03887 | Not Available | Negative | 4248752 - 4249408 | 25283.4 |
| nramp (natural resistance-associated macrophage protein) metal ion transporters | SAMN03003324_03888 | Not Available | Negative | 4249451 - 4250773 | 48288.8 |
| cd2+/zn2+-exporting atpase | SAMN03003324_03889 | Not Available | Negative | 4250778 - 4252937 | 76215.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

