Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper chaperone copz | SAMN03003324_03870 | Not Available | Negative | 4234783 - 4235385 | 21684.3 |
| dna-binding transcriptional regulator, arsr family | SAMN03003324_03871 | Not Available | Negative | 4235382 - 4235762 | 14022.5 |
| hypothetical protein | SAMN03003324_03872 | Not Available | Positive | 4235907 - 4236410 | 19063.9 |
| abi-like protein | SAMN03003324_03873 | Not Available | Positive | 4236936 - 4237616 | 26545.1 |
| cd2+/zn2+-exporting atpase | SAMN03003324_03874 | Not Available | Negative | 4237696 - 4239666 | 71331.4 |
| hypothetical protein | SAMN03003324_03875 | Not Available | Positive | 4239947 - 4240141 | 7749.44 |
| hypothetical protein | SAMN03003324_03876 | Not Available | Negative | 4240658 - 4240840 | 6069.36 |
| prc-barrel domain-containing protein | SAMN03003324_03877 | Not Available | Positive | 4240969 - 4241721 | 28401.1 |
| hypothetical protein | SAMN03003324_03878 | Not Available | Negative | 4241718 - 4241936 | 7913.09 |
| hypothetical protein | SAMN03003324_03879 | Not Available | Positive | 4242764 - 4243048 | 10804.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

