Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane fusion protein, cu(i)/ag(i) efflux system | SAMN03003324_03840 | Not Available | Negative | 4197035 - 4198255 | 44788.8 |
| multidrug efflux pump subunit acra (membrane-fusion protein) | SAMN03003324_03841 | Not Available | Negative | 4198260 - 4199477 | 44085.4 |
| outer membrane protein tolc | SAMN03003324_03842 | Not Available | Negative | 4199455 - 4200702 | 47527.4 |
| cu(i)/ag(i) efflux system membrane protein cusa/sila | SAMN03003324_03843 | Not Available | Negative | 4200689 - 4202626 | 71712.5 |
| heavy metal efflux pump, czca family | SAMN03003324_03844 | Not Available | Negative | 4202633 - 4203922 | 47806.1 |
| hypothetical protein | SAMN03003324_03845 | Not Available | Negative | 4204194 - 4204679 | 18308.8 |
| site-specific dna recombinase | SAMN03003324_03846 | Not Available | Positive | 4205089 - 4205676 | 21866.4 |
| hypothetical protein | SAMN03003324_03847 | Not Available | Positive | 4205836 - 4206852 | 38876.9 |
| predicted nucleotidyltransferase | SAMN03003324_03848 | Not Available | Positive | 4206842 - 4207618 | 29565.8 |
| primase c terminal 2 (prict-2) | SAMN03003324_03849 | Not Available | Positive | 4207670 - 4208698 | 39942.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

