Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_03819 | Not Available | Positive | 4178250 - 4178888 | 24081.0 |
| hypothetical protein | SAMN03003324_03821 | Not Available | Positive | 4180173 - 4180913 | 27839.5 |
| radc-like jab domain-containing protein | SAMN03003324_03822 | Not Available | Positive | 4180978 - 4182069 | 40568.2 |
| hypothetical protein | SAMN03003324_03823 | Not Available | Positive | 4182138 - 4182587 | 17477.2 |
| hypothetical protein | SAMN03003324_03824 | Not Available | Positive | 4182590 - 4182784 | 7252.26 |
| hypothetical protein | SAMN03003324_03825 | Not Available | Positive | 4182893 - 4183420 | 19868.3 |
| hypothetical protein | SAMN03003324_03826 | Not Available | Positive | 4183442 - 4183990 | 19235.2 |
| hypothetical protein | SAMN03003324_03827 | Not Available | Positive | 4184015 - 4184320 | 11506.9 |
| hypothetical protein | SAMN03003324_03828 | Not Available | Negative | 4184608 - 4185462 | 32471.8 |
| hypothetical protein | SAMN03003324_03829 | Not Available | Positive | 4185669 - 4186610 | 36227.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

