Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | SAMN03003324_00316 | Not Available | Negative | 341118 - 342269 | 44081.3 |
| histidine kinase | SAMN03003324_00317 | Not Available | Negative | 342426 - 344600 | 82102.8 |
| two component transcriptional regulator, luxr family | SAMN03003324_00318 | Not Available | Negative | 344613 - 345254 | 23658.9 |
| cheb methylesterase | SAMN03003324_00319 | Not Available | Negative | 345292 - 346152 | 31834.5 |
| pas domain s-box-containing protein | SAMN03003324_00320 | Not Available | Negative | 346177 - 347793 | 60927.9 |
| two-component system, chemotaxis family, cheb/cher fusion protein | SAMN03003324_00321 | Not Available | Negative | 347777 - 350737 | 112551.0 |
| two component transcriptional regulator, luxr family | SAMN03003324_00322 | Not Available | Negative | 350913 - 351569 | 24214.6 |
| small multidrug resistance pump | SAMN03003324_00323 | Not Available | Negative | 351693 - 352025 | 12040.3 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN03003324_00324 | Not Available | Negative | 352112 - 353698 | 59156.8 |
| hypothetical protein | SAMN03003324_00325 | Not Available | Positive | 354071 - 355042 | 36844.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

