Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| por secretion system c-terminal sorting domain-containing protein | SAMN03003324_03769 | Not Available | Positive | 4129469 - 4129984 | 19053.2 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN03003324_03770 | Not Available | Positive | 4130076 - 4130687 | 22955.4 |
| peptidase family m23 | SAMN03003324_03771 | Not Available | Positive | 4130694 - 4132415 | 63427.3 |
| peroxiredoxin q/bcp | SAMN03003324_03772 | Not Available | Positive | 4132502 - 4132978 | 17209.5 |
| transketolase | SAMN03003324_03773 | Not Available | Positive | 4133007 - 4133852 | 30814.5 |
| transketolase | SAMN03003324_03774 | Not Available | Positive | 4133956 - 4134912 | 34599.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN03003324_03775 | Not Available | Positive | 4134916 - 4135476 | 21896.2 |
| hypothetical protein | SAMN03003324_03776 | Not Available | Positive | 4135588 - 4136286 | 26429.0 |
| hypothetical protein | SAMN03003324_03777 | Not Available | Positive | 4136339 - 4136785 | 17677.1 |
| hypothetical protein | SAMN03003324_03778 | Not Available | Positive | 4136769 - 4137251 | 18388.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

