Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazoleglycerol-phosphate dehydratase | SAMN03003324_03699 | Not Available | Negative | 4049390 - 4050523 | 42350.4 |
| histidinol phosphate aminotransferase apoenzyme | SAMN03003324_03700 | Not Available | Negative | 4050525 - 4051571 | 38767.6 |
| histidinol dehydrogenase | SAMN03003324_03701 | Not Available | Negative | 4051561 - 4052859 | 46182.2 |
| atp phosphoribosyltransferase | SAMN03003324_03702 | Not Available | Negative | 4052916 - 4053767 | 30914.7 |
| l,d-transpeptidase catalytic domain | SAMN03003324_03703 | Not Available | Positive | 4054017 - 4055594 | 60686.8 |
| hypothetical protein | SAMN03003324_03704 | Not Available | Positive | 4055616 - 4055924 | 11679.5 |
| dihydroorotase | SAMN03003324_03705 | Not Available | Positive | 4055908 - 4057170 | 45208.4 |
| hypothetical protein | SAMN03003324_03706 | Not Available | Positive | 4057163 - 4057837 | 26204.4 |
| protein of unknown function | SAMN03003324_03707 | Not Available | Positive | 4057848 - 4058423 | 21196.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN03003324_03708 | Not Available | Positive | 4058509 - 4059462 | 36143.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

