Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fes assembly protein iscx | SAMN03003324_03679 | Not Available | Positive | 4034147 - 4034389 | 9817.28 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase) | SAMN03003324_03680 | Not Available | Positive | 4034390 - 4034917 | 19105.1 |
| septum formation protein | SAMN03003324_03681 | Not Available | Positive | 4034947 - 4035522 | 21189.5 |
| exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | SAMN03003324_03682 | Not Available | Negative | 4035542 - 4036453 | 33021.0 |
| abc-2 type transport system permease protein | SAMN03003324_03683 | Not Available | Negative | 4036485 - 4037864 | 50939.0 |
| abc-2 type transport system atp-binding protein | SAMN03003324_03684 | Not Available | Negative | 4037869 - 4038777 | 34487.7 |
| predicted purr-regulated permease perm | SAMN03003324_03685 | Not Available | Negative | 4038879 - 4039967 | 39702.0 |
| 4fe-4s dicluster domain-containing protein | SAMN03003324_03686 | Not Available | Negative | 4040073 - 4040423 | 12769.6 |
| acyl-coa reductase (luxc) | SAMN03003324_03687 | Not Available | Positive | 4040499 - 4041527 | 38408.7 |
| hypothetical protein | SAMN03003324_03688 | Not Available | Positive | 4041590 - 4041793 | 7679.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

