Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein involved in gliding motility gldc | SAMN03003324_03669 | Not Available | Positive | 4025735 - 4026070 | 13070.6 |
| hypothetical protein | SAMN03003324_03670 | Not Available | Positive | 4026071 - 4026493 | 15567.7 |
| heme exporter protein b | SAMN03003324_03671 | Not Available | Positive | 4026456 - 4027139 | 25420.3 |
| heme exporter protein c | SAMN03003324_03672 | Not Available | Positive | 4027307 - 4027972 | 25030.0 |
| hypothetical protein | SAMN03003324_03673 | Not Available | Positive | 4028024 - 4028239 | 7828.94 |
| glutamate dehydrogenase (nad(p)+) | SAMN03003324_03674 | Not Available | Positive | 4028393 - 4029814 | 51701.0 |
| cytochrome c-type biogenesis protein ccme | SAMN03003324_03675 | Not Available | Positive | 4030008 - 4030418 | 15583.7 |
| cytochrome c-type biogenesis protein ccmf | SAMN03003324_03676 | Not Available | Positive | 4030424 - 4032895 | 92609.4 |
| predicted oxidoreductase, contains short-chain dehydrogenase (sdr) and duf2520 domains | SAMN03003324_03677 | Not Available | Positive | 4032976 - 4033740 | 27302.9 |
| ferredoxin, 2fe-2s | SAMN03003324_03678 | Not Available | Positive | 4033779 - 4034111 | 12153.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

