Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphoryl diester phosphodiesterase | SAMN03003324_03659 | Not Available | Negative | 4015064 - 4016035 | 35755.7 |
| protein of unknown function (du1801) | SAMN03003324_03660 | Not Available | Negative | 4016110 - 4016727 | 23471.3 |
| dna polymerase iii, beta subunit | SAMN03003324_03661 | Not Available | Positive | 4016894 - 4018018 | 41337.5 |
| membrane-associated protein | SAMN03003324_03662 | Not Available | Positive | 4018095 - 4018751 | 24515.6 |
| s1/p1 nuclease | SAMN03003324_03663 | Not Available | Negative | 4018757 - 4019617 | 33168.8 |
| molecular chaperone hsca | SAMN03003324_03664 | Not Available | Negative | 4019674 - 4021572 | 68737.3 |
| protein of unknown function | SAMN03003324_03665 | Not Available | Negative | 4021596 - 4022732 | 43034.2 |
| dihydroorotase | SAMN03003324_03666 | Not Available | Negative | 4022732 - 4024066 | 49187.0 |
| atp-dependent rna helicase rhle | SAMN03003324_03667 | Not Available | Positive | 4024126 - 4025463 | 50097.1 |
| hypothetical protein | SAMN03003324_03668 | Not Available | Positive | 4025465 - 4025686 | 8115.68 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

