Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoylalanine--d-glutamate ligase | SAMN03003324_03619 | Not Available | Positive | 3967737 - 3969080 | 49414.1 |
| cell division protein ftsw | SAMN03003324_03620 | Not Available | Positive | 3969084 - 3970292 | 43845.2 |
| udp-n-acetylglucosamine-n- acetylmuramylpentapeptide n-acetylglucosamine transferase | SAMN03003324_03621 | Not Available | Positive | 3970302 - 3971408 | 39914.0 |
| udp-n-acetylmuramate--l-alanine ligase | SAMN03003324_03622 | Not Available | Positive | 3971414 - 3972769 | 49951.9 |
| cell division protein ftsq | SAMN03003324_03623 | Not Available | Positive | 3972762 - 3973853 | 40725.2 |
| cell division protein ftsa | SAMN03003324_03624 | Not Available | Positive | 3973905 - 3975266 | 49392.9 |
| cell division protein ftsz | SAMN03003324_03625 | Not Available | Positive | 3975407 - 3977032 | 59206.9 |
| glycine c-acetyltransferase | SAMN03003324_03626 | Not Available | Positive | 3977222 - 3978436 | 45229.9 |
| hypothetical protein | SAMN03003324_03627 | Not Available | Positive | 3978701 - 3978877 | 6597.93 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN03003324_03628 | Not Available | Negative | 3978945 - 3979823 | 31389.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

