Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abc transport system permease protein | SAMN03003324_03597 | Not Available | Negative | 3946782 - 3948014 | 43651.8 |
| iron-sulfur cluster assembly protein | SAMN03003324_03598 | Not Available | Negative | 3948101 - 3948451 | 12735.0 |
| hypothetical protein | SAMN03003324_03599 | Not Available | Positive | 3948521 - 3948664 | 5133.32 |
| chromosomal replication initiator protein dnaa | SAMN03003324_03600 | Not Available | Positive | 3948896 - 3950326 | 53904.1 |
| nudix domain-containing protein | SAMN03003324_03601 | Not Available | Negative | 3950323 - 3950877 | 20959.0 |
| hypothetical protein | SAMN03003324_03602 | Not Available | Negative | 3950974 - 3951369 | 15374.8 |
| uncharacterized protein | SAMN03003324_03603 | Not Available | Negative | 3951369 - 3952136 | 26260.7 |
| tlp18.3, psb32 and molo-1 founding protein of phosphatase | SAMN03003324_03604 | Not Available | Negative | 3952200 - 3952646 | 16464.7 |
| lema protein | SAMN03003324_03605 | Not Available | Negative | 3952725 - 3953315 | 21741.0 |
| hypothetical protein | SAMN03003324_03606 | Not Available | Positive | 3953538 - 3955079 | 55922.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

