Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| virginiamycin a acetyltransferase | SAMN03003324_00296 | Not Available | Positive | 316424 - 317059 | 24036.7 |
| peptidase family m28 | SAMN03003324_00297 | Not Available | Negative | 317123 - 318673 | 56286.8 |
| chemotaxis protein motb | SAMN03003324_00298 | Not Available | Negative | 318913 - 319776 | 31927.7 |
| succinate dehydrogenase / fumarate reductase iron-sulfur subunit | SAMN03003324_00299 | Not Available | Negative | 319856 - 320599 | 27148.6 |
| succinate dehydrogenase subunit a | SAMN03003324_00300 | Not Available | Negative | 320606 - 322522 | 70895.1 |
| succinate dehydrogenase / fumarate reductase cytochrome b subunit | SAMN03003324_00301 | Not Available | Negative | 322519 - 323196 | 25527.7 |
| divalent anion:na+ symporter, dass family | SAMN03003324_00302 | Not Available | Negative | 323214 - 324689 | 53220.2 |
| phosphate-selective porin o and p | SAMN03003324_00303 | Not Available | Negative | 324708 - 325829 | 42438.8 |
| hypothetical protein | SAMN03003324_00304 | Not Available | Positive | 325914 - 326156 | 9633.98 |
| gtpase, g3e family | SAMN03003324_00305 | Not Available | Negative | 326218 - 327414 | 45190.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

