Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrimidine operon attenuation protein / uracil phosphoribosyltransferase | SAMN03003324_03587 | Not Available | Positive | 3936755 - 3937264 | 18990.4 |
| hypothetical protein | SAMN03003324_03588 | Not Available | Positive | 3937270 - 3938295 | 38180.6 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SAMN03003324_03589 | Not Available | Positive | 3938375 - 3939223 | 31912.1 |
| ferrochelatase | SAMN03003324_03590 | Not Available | Positive | 3939344 - 3940369 | 38182.1 |
| 3-deoxy-d-manno-octulosonic-acid transferase | SAMN03003324_03591 | Not Available | Negative | 3940366 - 3941586 | 46321.9 |
| udp-glucose dehydrogenase | SAMN03003324_03592 | Not Available | Positive | 3941721 - 3943031 | 48112.0 |
| dtdp-glucose 4,6-dehydratase | SAMN03003324_03593 | Not Available | Positive | 3943031 - 3944020 | 37424.7 |
| udp-glucose 4-epimerase | SAMN03003324_03594 | Not Available | Positive | 3944021 - 3945043 | 37060.9 |
| hypothetical protein | SAMN03003324_03595 | Not Available | Positive | 3945044 - 3945610 | 21784.7 |
| dtdp-glucose 4,6-dehydratase | SAMN03003324_03596 | Not Available | Positive | 3945633 - 3946688 | 40003.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

