Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-isopropylmalate synthase | SAMN03003324_03557 | Not Available | Negative | 3905861 - 3907369 | 54985.4 |
| 3-isopropylmalate dehydrogenase | SAMN03003324_03558 | Not Available | Negative | 3907378 - 3908469 | 39652.6 |
| molybdate transport system atp-binding protein | SAMN03003324_03559 | Not Available | Negative | 3908548 - 3910017 | 54912.7 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase small subunit | SAMN03003324_03560 | Not Available | Negative | 3910017 - 3910601 | 21775.6 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase large subunit | SAMN03003324_03561 | Not Available | Negative | 3910637 - 3912052 | 51073.1 |
| ketol-acid reductoisomerase | SAMN03003324_03562 | Not Available | Negative | 3912107 - 3913588 | 54225.4 |
| dinb superfamily protein | SAMN03003324_03563 | Not Available | Negative | 3913623 - 3914090 | 17855.4 |
| acetolactate synthase, small subunit | SAMN03003324_03564 | Not Available | Negative | 3914126 - 3914728 | 23488.2 |
| acetolactate synthase, large subunit | SAMN03003324_03565 | Not Available | Negative | 3914737 - 3916473 | 62941.9 |
| dihydroxyacid dehydratase | SAMN03003324_03566 | Not Available | Negative | 3916500 - 3918200 | 60064.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

