Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein tolc | SAMN03003324_03496 | Not Available | Negative | 3832061 - 3833512 | 54823.9 |
| hlyd family secretion protein | SAMN03003324_03497 | Not Available | Negative | 3833524 - 3834771 | 46030.8 |
| glucosamine-6-phosphate isomerases/6-phosphogluconolactonase | SAMN03003324_03499 | Not Available | Negative | 3835410 - 3835822 | 15717.9 |
| surface antigen | SAMN03003324_03500 | Not Available | Positive | 3836119 - 3838695 | 98173.7 |
| protein n-acetyltransferase, rimj/riml family | SAMN03003324_03501 | Not Available | Positive | 3838732 - 3839331 | 22845.3 |
| uncharacterized conserved protein, duf1015 family | SAMN03003324_03502 | Not Available | Positive | 3839558 - 3840772 | 46245.8 |
| mfs transporter, fhs family, l-fucose permease | SAMN03003324_03503 | Not Available | Positive | 3840908 - 3842152 | 44847.1 |
| l-fuconolactonase | SAMN03003324_03504 | Not Available | Positive | 3842160 - 3842984 | 30601.4 |
| zn-dependent amino-or carboxypeptidase, m28 family | SAMN03003324_03505 | Not Available | Positive | 3843048 - 3844697 | 60059.1 |
| hypothetical protein | SAMN03003324_03506 | Not Available | Negative | 3844779 - 3845570 | 29810.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

