Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_03436 | Not Available | Positive | 3757591 - 3758298 | 26564.0 |
| acetyl-coenzyme a synthetase | SAMN03003324_03437 | Not Available | Negative | 3758349 - 3760244 | 70165.2 |
| large subunit ribosomal protein l28 | SAMN03003324_03438 | Not Available | Positive | 3760560 - 3760793 | 8852.91 |
| lsu ribosomal protein l33p | SAMN03003324_03439 | Not Available | Positive | 3760833 - 3761015 | 6956.69 |
| protein of unknown function | SAMN03003324_03440 | Not Available | Positive | 3761041 - 3761208 | 5881.14 |
| fused signal recognition particle receptor | SAMN03003324_03441 | Not Available | Positive | 3761281 - 3762243 | 34672.9 |
| ssu ribosomal protein s12p methylthiotransferase | SAMN03003324_03442 | Not Available | Positive | 3762273 - 3763607 | 50394.5 |
| bacillithiol biosynthesis cysteine-adding enzyme bshc | SAMN03003324_03443 | Not Available | Positive | 3763654 - 3765240 | 60304.1 |
| malate/lactate/ureidoglycolate dehydrogenase, ldh2 family | SAMN03003324_03444 | Not Available | Positive | 3765248 - 3766333 | 38758.4 |
| signal peptidase i | SAMN03003324_03445 | Not Available | Negative | 3766421 - 3767617 | 45762.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

