Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box-containing protein | SAMN03003324_03426 | Not Available | Positive | 3746801 - 3748417 | 60581.0 |
| response regulator receiver domain-containing protein | SAMN03003324_03427 | Not Available | Positive | 3748509 - 3748868 | 13667.4 |
| arac-type dna-binding protein | SAMN03003324_03428 | Not Available | Negative | 3748873 - 3749718 | 33190.2 |
| 3-hexulose-6-phosphate isomerase | SAMN03003324_03429 | Not Available | Positive | 3749927 - 3750547 | 22154.9 |
| 3-hexulose-6-phosphate synthase | SAMN03003324_03430 | Not Available | Positive | 3750570 - 3751202 | 21281.8 |
| response regulator receiver domain-containing protein | SAMN03003324_03431 | Not Available | Positive | 3751328 - 3751705 | 14357.3 |
| lipid-a-disaccharide synthase | SAMN03003324_03432 | Not Available | Negative | 3751740 - 3752870 | 42009.4 |
| 5'-nucleotidase /3'-nucleotidase /exopolyphosphatase | SAMN03003324_03433 | Not Available | Negative | 3752912 - 3753691 | 28250.6 |
| predicted zn-dependent peptidase | SAMN03003324_03434 | Not Available | Positive | 3753894 - 3756827 | 110166.0 |
| uncharacterized conserved protein yjbj, upf0337 family | SAMN03003324_03435 | Not Available | Negative | 3757243 - 3757428 | 7176.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

