Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph:quinone reductase | SAMN03003324_03416 | Not Available | Negative | 3740140 - 3741123 | 35371.6 |
| transcriptional regulator, hxlr family | SAMN03003324_03417 | Not Available | Positive | 3741219 - 3741554 | 12539.2 |
| hypothetical protein | SAMN03003324_03418 | Not Available | Negative | 3741848 - 3742015 | 6555.43 |
| hypothetical protein | SAMN03003324_03419 | Not Available | Negative | 3742099 - 3742458 | 14227.7 |
| hypothetical protein | SAMN03003324_03420 | Not Available | Positive | 3742661 - 3743032 | 13474.6 |
| hypothetical protein | SAMN03003324_03421 | Not Available | Negative | 3743426 - 3743929 | 19455.8 |
| Trna-ala | Not Available | Not Available | Positive | 3744053 - 3744126 | Not Available |
| mannose-6-phosphate isomerase, cupin superfamily | SAMN03003324_03423 | Not Available | Negative | 3744211 - 3744549 | 12579.1 |
| heme-degrading monooxygenase hmoa | SAMN03003324_03424 | Not Available | Positive | 3744633 - 3744938 | 11946.1 |
| peptidase family m1 | SAMN03003324_03425 | Not Available | Negative | 3744931 - 3746589 | 62866.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

