Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_03406 | Not Available | Negative | 3721468 - 3722379 | 34874.5 |
| endonuclease g | SAMN03003324_03407 | Not Available | Positive | 3722704 - 3724350 | 60215.7 |
| fimbrillin-like | SAMN03003324_03408 | Not Available | Positive | 3724376 - 3725815 | 51063.7 |
| glycosyl hydrolases family 2 | SAMN03003324_03409 | Not Available | Negative | 3725920 - 3728316 | 90102.8 |
| starch-binding associating with outer membrane | SAMN03003324_03410 | Not Available | Negative | 3728417 - 3730117 | 63303.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN03003324_03411 | Not Available | Negative | 3730129 - 3733254 | 114085.0 |
| signal transduction histidine kinase | SAMN03003324_03412 | Not Available | Negative | 3733492 - 3737664 | 157628.0 |
| nucleoside-diphosphate-sugar epimerase | SAMN03003324_03413 | Not Available | Negative | 3737823 - 3738890 | 40043.8 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN03003324_03414 | Not Available | Positive | 3739023 - 3739640 | 23884.1 |
| hypothetical protein | SAMN03003324_03415 | Not Available | Positive | 3739702 - 3740064 | 14261.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

