Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN03003324_03396 | Not Available | Negative | 3707256 - 3707894 | 25036.4 |
| cytochrome c peroxidase | SAMN03003324_03397 | Not Available | Negative | 3708279 - 3710159 | 69333.9 |
| purple acid phosphatase, n-terminal domain | SAMN03003324_03398 | Not Available | Negative | 3710167 - 3711570 | 52889.3 |
| 3-phytase | SAMN03003324_03399 | Not Available | Negative | 3711582 - 3712649 | 38878.1 |
| hypothetical protein | SAMN03003324_03400 | Not Available | Negative | 3712690 - 3713952 | 45431.6 |
| tonb-dependent receptor | SAMN03003324_03401 | Not Available | Negative | 3713975 - 3716731 | 102474.0 |
| tetratricopeptide repeat-containing protein | SAMN03003324_03402 | Not Available | Negative | 3716993 - 3718588 | 61613.1 |
| hypothetical protein | SAMN03003324_03403 | Not Available | Positive | 3718641 - 3718856 | 8103.22 |
| iron complex outermembrane recepter protein | SAMN03003324_03404 | Not Available | Positive | 3718856 - 3721231 | 85097.9 |
| Trna-tyr | Not Available | Not Available | Positive | 3721316 - 3721398 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

