Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| myo-inositol-1(or 4)-monophosphatase | SAMN03003324_00276 | Not Available | Negative | 292584 - 293381 | 29744.3 |
| arac-type dna-binding protein | SAMN03003324_00277 | Not Available | Negative | 293445 - 294380 | 35674.2 |
| quinol monooxygenase ygin | SAMN03003324_00278 | Not Available | Positive | 294615 - 294905 | 11331.6 |
| putative intracellular protease/amidase | SAMN03003324_00279 | Not Available | Positive | 294918 - 295589 | 24443.8 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN03003324_00280 | Not Available | Negative | 295680 - 296246 | 22188.5 |
| aerobic c4-dicarboxylate transport protein | SAMN03003324_00281 | Not Available | Positive | 296383 - 297675 | 46503.6 |
| mn-containing catalase | SAMN03003324_00282 | Not Available | Positive | 297814 - 298761 | 35017.3 |
| pas domain-containing protein | SAMN03003324_00283 | Not Available | Positive | 298787 - 299938 | 44022.5 |
| hypothetical protein | SAMN03003324_00284 | Not Available | Positive | 299981 - 300217 | 8494.61 |
| heat shock protein hsp20 | SAMN03003324_00285 | Not Available | Negative | 300308 - 300754 | 16967.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

