Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper chaperone copz | SAMN03003324_03366 | Not Available | Positive | 3669950 - 3670807 | 31223.2 |
| hypothetical protein | SAMN03003324_03367 | Not Available | Positive | 3670821 - 3671126 | 11410.3 |
| cu2+-exporting atpase | SAMN03003324_03368 | Not Available | Positive | 3671145 - 3673259 | 75967.6 |
| protein of unknown function | SAMN03003324_03369 | Not Available | Positive | 3673265 - 3673924 | 23869.1 |
| haem-binding domain-containing protein | SAMN03003324_03370 | Not Available | Positive | 3674050 - 3674481 | 16403.6 |
| multicopper oxidase | SAMN03003324_03371 | Not Available | Positive | 3674494 - 3674994 | 19177.7 |
| multicopper oxidase | SAMN03003324_03372 | Not Available | Positive | 3675033 - 3676766 | 66427.1 |
| hypothetical protein | SAMN03003324_03373 | Not Available | Positive | 3676854 - 3677774 | 34931.8 |
| uncharacterized membrane protein ykgb | SAMN03003324_03374 | Not Available | Positive | 3677774 - 3678406 | 23127.6 |
| hypothetical protein | SAMN03003324_03375 | Not Available | Positive | 3678452 - 3678880 | 16148.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

