Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cellulose biosynthesis protein bcsq | SAMN03003324_03356 | Not Available | Negative | 3659085 - 3659852 | 29107.4 |
| hypothetical protein | SAMN03003324_03357 | Not Available | Positive | 3660329 - 3660586 | 9752.46 |
| hypothetical protein | SAMN03003324_03358 | Not Available | Positive | 3660570 - 3661007 | 16885.6 |
| relaxase/mobilisation nuclease domain-containing protein | SAMN03003324_03359 | Not Available | Positive | 3661010 - 3662290 | 48499.8 |
| regulatory protein, arsr family | SAMN03003324_03360 | Not Available | Positive | 3662335 - 3662793 | 17831.8 |
| copper chaperone copz | SAMN03003324_03361 | Not Available | Positive | 3662790 - 3663383 | 21662.4 |
| type iv secretory pathway, vird4 component, trag/trad family atpase | SAMN03003324_03362 | Not Available | Positive | 3663794 - 3665788 | 75912.7 |
| arac-type dna-binding protein | SAMN03003324_03363 | Not Available | Positive | 3665895 - 3666458 | 21507.2 |
| cu2+-exporting atpase | SAMN03003324_03364 | Not Available | Positive | 3666548 - 3668959 | 86720.6 |
| copper chaperone copz | SAMN03003324_03365 | Not Available | Positive | 3669059 - 3669283 | 8220.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

