Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacteroides conjugative transposon trak protein | SAMN03003324_03346 | Not Available | Negative | 3648959 - 3649582 | 24089.6 |
| bacteroides conjugative transposon traj protein | SAMN03003324_03347 | Not Available | Negative | 3649601 - 3650596 | 36587.8 |
| protein of unknown function | SAMN03003324_03348 | Not Available | Negative | 3650599 - 3651231 | 23785.6 |
| bacteroides conjugation system atpase, trag family | SAMN03003324_03349 | Not Available | Negative | 3651260 - 3653764 | 95865.4 |
| protein of unknown function | SAMN03003324_03350 | Not Available | Negative | 3653761 - 3654093 | 12419.6 |
| protein of unknown function | SAMN03003324_03351 | Not Available | Negative | 3654105 - 3654410 | 10662.0 |
| iron complex outermembrane recepter protein | SAMN03003324_03352 | Not Available | Positive | 3655000 - 3657171 | 81727.6 |
| cation efflux family protein | SAMN03003324_03353 | Not Available | Positive | 3657175 - 3657969 | 29529.6 |
| hypothetical protein | SAMN03003324_03354 | Not Available | Negative | 3658030 - 3658665 | 23710.9 |
| protein of unknown function | SAMN03003324_03355 | Not Available | Negative | 3658668 - 3659072 | 15893.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

