Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_03336 | Not Available | Positive | 3639433 - 3641034 | 62213.1 |
| hypothetical protein | SAMN03003324_03337 | Not Available | Positive | 3641034 - 3643685 | 101974.0 |
| tigr02391 family protein | SAMN03003324_03338 | Not Available | Negative | 3643725 - 3644525 | 30384.2 |
| hypothetical protein | SAMN03003324_03339 | Not Available | Negative | 3644536 - 3644808 | 10540.1 |
| protein of unknown function | SAMN03003324_03340 | Not Available | Negative | 3644911 - 3645360 | 17192.2 |
| conjugative transposon protein trao | SAMN03003324_03341 | Not Available | Negative | 3645373 - 3645933 | 21139.4 |
| bacteroides conjugative transposon tran protein | SAMN03003324_03342 | Not Available | Negative | 3645954 - 3646847 | 34041.1 |
| bacteroides conjugative transposon tram protein | SAMN03003324_03343 | Not Available | Negative | 3646872 - 3648221 | 49228.9 |
| hypothetical protein | SAMN03003324_03344 | Not Available | Negative | 3648208 - 3648495 | 11312.8 |
| hypothetical protein | SAMN03003324_03345 | Not Available | Negative | 3648519 - 3648947 | 15960.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

