Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoesterase, mj0936 family | SAMN03003324_03326 | Not Available | Positive | 3632344 - 3633117 | 29477.9 |
| glycine cleavage system h protein | SAMN03003324_03327 | Not Available | Positive | 3633134 - 3633511 | 14218.7 |
| arsenite transporter, acr3 family | SAMN03003324_03328 | Not Available | Positive | 3633514 - 3634554 | 38740.1 |
| sodium/proton antiporter, nhaa family | SAMN03003324_03329 | Not Available | Negative | 3634557 - 3635744 | 42759.7 |
| hypothetical protein | SAMN03003324_03330 | Not Available | Negative | 3635966 - 3636181 | 8440.44 |
| protein of unknown function | SAMN03003324_03331 | Not Available | Positive | 3636448 - 3636915 | 17506.1 |
| hypothetical protein | SAMN03003324_03332 | Not Available | Positive | 3637012 - 3637998 | 38797.7 |
| hypothetical protein | SAMN03003324_03333 | Not Available | Negative | 3638010 - 3638399 | 14612.6 |
| helix-turn-helix domain-containing protein | SAMN03003324_03334 | Not Available | Negative | 3638672 - 3638977 | 11974.6 |
| helix-turn-helix domain-containing protein | SAMN03003324_03335 | Not Available | Negative | 3638985 - 3639263 | 10811.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

