Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prtrc system protein c | SAMN03003324_03316 | Not Available | Positive | 3624819 - 3625037 | 8210.98 |
| hypothetical protein | SAMN03003324_03317 | Not Available | Positive | 3625053 - 3626219 | 45525.7 |
| prtrc system protein b | SAMN03003324_03318 | Not Available | Positive | 3626216 - 3626938 | 27384.8 |
| hypothetical protein | SAMN03003324_03319 | Not Available | Positive | 3626938 - 3627204 | 9459.57 |
| prtrc system thif family protein | SAMN03003324_03320 | Not Available | Positive | 3627147 - 3627746 | 22838.9 |
| sulfate permease, sulp family | SAMN03003324_03321 | Not Available | Positive | 3628223 - 3629758 | 54936.1 |
| dna-binding transcriptional regulator, arsr family | SAMN03003324_03322 | Not Available | Positive | 3629870 - 3630199 | 12166.8 |
| hypothetical protein | SAMN03003324_03323 | Not Available | Positive | 3630266 - 3630739 | 17294.8 |
| uncharacterized membrane protein ypha, doxx/surf4 family | SAMN03003324_03324 | Not Available | Positive | 3630752 - 3631183 | 15520.7 |
| chromate transporter | SAMN03003324_03325 | Not Available | Positive | 3631173 - 3632300 | 40913.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

