Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f-type h+-transporting atpase subunit c | SAMN03003324_03306 | Not Available | Negative | 3617651 - 3617854 | 6368.03 |
| f-type h+-transporting atpase subunit a | SAMN03003324_03307 | Not Available | Negative | 3617886 - 3619016 | 42393.2 |
| hypothetical protein | SAMN03003324_03308 | Not Available | Negative | 3619034 - 3619420 | 14470.4 |
| site-specific recombinase xerd | SAMN03003324_03309 | Not Available | Positive | 3619698 - 3620948 | 48470.8 |
| single-strand dna-binding protein | SAMN03003324_03310 | Not Available | Positive | 3621596 - 3621973 | 13842.0 |
| phage/plasmid-like protein tigr03299 | SAMN03003324_03311 | Not Available | Positive | 3622017 - 3623090 | 39421.7 |
| hypothetical protein | SAMN03003324_03312 | Not Available | Positive | 3623143 - 3623625 | 19256.0 |
| hypothetical protein | SAMN03003324_03313 | Not Available | Positive | 3623637 - 3623849 | 8205.01 |
| hypothetical protein | SAMN03003324_03314 | Not Available | Positive | 3623994 - 3624176 | 7321.62 |
| prtrc system protein e | SAMN03003324_03315 | Not Available | Positive | 3624189 - 3624791 | 22727.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

