Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnase hii | SAMN03003324_03296 | Not Available | Negative | 3609327 - 3609938 | 22681.1 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN03003324_03297 | Not Available | Negative | 3609957 - 3611093 | 42125.6 |
| hypothetical protein | SAMN03003324_03298 | Not Available | Negative | 3611071 - 3612048 | 37958.9 |
| holliday junction endonuclease ruvc | SAMN03003324_03299 | Not Available | Positive | 3612092 - 3612655 | 20498.2 |
| hypothetical protein | SAMN03003324_03300 | Not Available | Negative | 3612780 - 3612995 | 7968.04 |
| 5'-nucleotidase, lipoprotein e(p4) family | SAMN03003324_03301 | Not Available | Negative | 3613066 - 3613860 | 29578.9 |
| atp synthase f1 subcomplex gamma subunit | SAMN03003324_03302 | Not Available | Negative | 3613959 - 3614846 | 32810.7 |
| f-type h+-transporting atpase subunit alpha | SAMN03003324_03303 | Not Available | Negative | 3614874 - 3616448 | 56622.2 |
| atp synthase f1 subcomplex delta subunit | SAMN03003324_03304 | Not Available | Negative | 3616493 - 3617041 | 19926.2 |
| atp synthase f0 subcomplex b subunit | SAMN03003324_03305 | Not Available | Negative | 3617068 - 3617562 | 18404.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

