Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioester hydrolase | SAMN03003324_00266 | Not Available | Positive | 282099 - 282506 | 16096.5 |
| membrane protein | SAMN03003324_00267 | Not Available | Positive | 282587 - 283573 | 37485.1 |
| Trna-ser | Not Available | Not Available | Positive | 283673 - 283760 | Not Available |
| protein of unknown function | SAMN03003324_00269 | Not Available | Negative | 284276 - 285082 | 30530.2 |
| hypothetical protein | SAMN03003324_00270 | Not Available | Positive | 285262 - 286749 | 56633.7 |
| hypothetical protein | SAMN03003324_00271 | Not Available | Negative | 286906 - 287874 | 35751.7 |
| two component transcriptional regulator, luxr family | SAMN03003324_00272 | Not Available | Negative | 288167 - 288826 | 24316.7 |
| signal transduction histidine kinase | SAMN03003324_00273 | Not Available | Negative | 288810 - 290864 | 78505.4 |
| hypothetical protein | SAMN03003324_00274 | Not Available | Positive | 291404 - 291802 | 14653.6 |
| putative nadh-flavin reductase | SAMN03003324_00275 | Not Available | Negative | 291938 - 292564 | 22618.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

