Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short c-terminal domain-containing protein | SAMN03003324_03286 | Not Available | Positive | 3599145 - 3599801 | 25097.2 |
| apolipoprotein n-acyltransferase | SAMN03003324_03287 | Not Available | Positive | 3599808 - 3601433 | 60809.8 |
| nad+ synthase (glutamine-hydrolysing) | SAMN03003324_03288 | Not Available | Negative | 3601512 - 3603152 | 60787.1 |
| outer membrane protein beta-barrel domain-containing protein | SAMN03003324_03289 | Not Available | Negative | 3603163 - 3603825 | 24573.4 |
| nte family protein | SAMN03003324_03290 | Not Available | Positive | 3604145 - 3604948 | 29453.3 |
| 2-phosphosulfolactate phosphatase | SAMN03003324_03291 | Not Available | Negative | 3604945 - 3605664 | 25854.0 |
| aminomethyltransferase | SAMN03003324_03292 | Not Available | Negative | 3605698 - 3606777 | 39505.0 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN03003324_03293 | Not Available | Negative | 3606820 - 3608031 | 47262.8 |
| hypothetical protein | SAMN03003324_03294 | Not Available | Negative | 3608186 - 3608641 | 17316.9 |
| uncharacterized phage-associated protein | SAMN03003324_03295 | Not Available | Negative | 3608641 - 3609201 | 21228.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

