Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_03276 | Not Available | Negative | 3588987 - 3589232 | 9215.36 |
| isoleucyl-trna synthetase | SAMN03003324_03277 | Not Available | Positive | 3589401 - 3592796 | 128891.0 |
| transcriptional regulator, trar/dksa family | SAMN03003324_03278 | Not Available | Positive | 3592802 - 3593185 | 14507.3 |
| signal peptidase ii . aspartic peptidase. merops family a08 | SAMN03003324_03279 | Not Available | Positive | 3593185 - 3593787 | 22942.4 |
| hypothetical protein | SAMN03003324_03280 | Not Available | Positive | 3593863 - 3594624 | 28674.0 |
| hypothetical protein | SAMN03003324_03281 | Not Available | Positive | 3594796 - 3595104 | 11415.5 |
| protein of unknown function | SAMN03003324_03282 | Not Available | Positive | 3595303 - 3595794 | 18808.6 |
| cubico group peptidase, beta-lactamase class c family | SAMN03003324_03283 | Not Available | Positive | 3595772 - 3596944 | 43727.0 |
| seryl-trna synthetase | SAMN03003324_03284 | Not Available | Negative | 3596994 - 3598265 | 47587.8 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN03003324_03285 | Not Available | Positive | 3598297 - 3599040 | 27927.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

