Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_03266 | Not Available | Positive | 3572473 - 3572787 | 11412.0 |
| cobalt-zinc-cadmium resistance protein czca | SAMN03003324_03267 | Not Available | Positive | 3572871 - 3577286 | 162130.0 |
| membrane fusion protein, cobalt-zinc-cadmium efflux system | SAMN03003324_03268 | Not Available | Positive | 3577270 - 3578484 | 43928.4 |
| transketolase | SAMN03003324_03269 | Not Available | Negative | 3578572 - 3580578 | 73012.8 |
| aldose 1-epimerase | SAMN03003324_03270 | Not Available | Negative | 3580638 - 3581816 | 42437.8 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN03003324_03271 | Not Available | Positive | 3581964 - 3582671 | 27320.3 |
| l-ribulokinase | SAMN03003324_03272 | Not Available | Positive | 3582870 - 3584582 | 61980.0 |
| l-ribulose 5-phosphate 4-epimerase | SAMN03003324_03273 | Not Available | Positive | 3584588 - 3585286 | 25707.4 |
| l-arabinose isomerase | SAMN03003324_03274 | Not Available | Positive | 3585297 - 3586799 | 55661.4 |
| solute:na+ symporter, sss family | SAMN03003324_03275 | Not Available | Positive | 3586830 - 3588515 | 61023.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

