Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide-methionine (s)-s-oxide reductase | SAMN03003324_03246 | Not Available | Positive | 3552938 - 3553534 | 22265.6 |
| gdsl-like lipase/acylhydrolase | SAMN03003324_03247 | Not Available | Negative | 3553631 - 3554935 | 46076.9 |
| long-chain fatty acid transport protein | SAMN03003324_03248 | Not Available | Negative | 3554960 - 3556174 | 43823.4 |
| nitroreductase | SAMN03003324_03249 | Not Available | Positive | 3556477 - 3557112 | 23525.1 |
| hypothetical protein | SAMN03003324_03250 | Not Available | Positive | 3557310 - 3560030 | 100780.0 |
| phage shock protein c (pspc) family protein | SAMN03003324_03251 | Not Available | Negative | 3560125 - 3561717 | 60233.9 |
| transcriptional regulator, padr family | SAMN03003324_03252 | Not Available | Negative | 3561771 - 3562106 | 12302.9 |
| hypothetical protein | SAMN03003324_03253 | Not Available | Positive | 3562445 - 3562603 | 5782.47 |
| hypothetical protein | SAMN03003324_03254 | Not Available | Negative | 3562720 - 3563862 | 41560.1 |
| hypothetical protein | SAMN03003324_03255 | Not Available | Positive | 3563942 - 3564250 | 11968.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

